Extra libs: ap.lib

aPLib support with apultra.

1 files changed, 180 insertions, 0 deletions

diff --git a/tools/apultra/src/libdivsufsort/include/divsufsort.h.cmake b/tools/apultra/src/libdivsufsort/include/divsufsort.h.cmake
new file mode 100644
index 0000000..bcaba7c
--- /dev/null
+++ b/tools/apultra/src/libdivsufsort/include/divsufsort.h.cmake
@@ -0,0 +1,180 @@
+/*
+ * divsufsort@W64BIT@.h for libdivsufsort@W64BIT@
+ * Copyright (c) 2003-2008 Yuta Mori All Rights Reserved.
+ *
+ * Permission is hereby granted, free of charge, to any person
+ * obtaining a copy of this software and associated documentation
+ * files (the "Software"), to deal in the Software without
+ * restriction, including without limitation the rights to use,
+ * copy, modify, merge, publish, distribute, sublicense, and/or sell
+ * copies of the Software, and to permit persons to whom the
+ * Software is furnished to do so, subject to the following
+ * conditions:
+ *
+ * The above copyright notice and this permission notice shall be
+ * included in all copies or substantial portions of the Software.
+ *
+ * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+ * EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
+ * OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+ * NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
+ * HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
+ * WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
+ * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
+ * OTHER DEALINGS IN THE SOFTWARE.
+ */
+
+#ifndef _DIVSUFSORT@W64BIT@_H
+#define _DIVSUFSORT@W64BIT@_H 1
+
+#ifdef __cplusplus
+extern "C" {
+#endif /* __cplusplus */
+
+@INCFILE@
+
+#ifndef DIVSUFSORT_API
+# ifdef DIVSUFSORT_BUILD_DLL
+#  define DIVSUFSORT_API @DIVSUFSORT_EXPORT@
+# else
+#  define DIVSUFSORT_API @DIVSUFSORT_IMPORT@
+# endif
+#endif
+
+/*- Datatypes -*/
+#ifndef SAUCHAR_T
+#define SAUCHAR_T
+typedef @SAUCHAR_TYPE@ sauchar_t;
+#endif /* SAUCHAR_T */
+#ifndef SAINT_T
+#define SAINT_T
+typedef @SAINT32_TYPE@ saint_t;
+#endif /* SAINT_T */
+#ifndef SAIDX@W64BIT@_T
+#define SAIDX@W64BIT@_T
+typedef @SAINDEX_TYPE@ saidx@W64BIT@_t;
+#endif /* SAIDX@W64BIT@_T */
+#ifndef PRIdSAINT_T
+#define PRIdSAINT_T @SAINT_PRId@
+#endif /* PRIdSAINT_T */
+#ifndef PRIdSAIDX@W64BIT@_T
+#define PRIdSAIDX@W64BIT@_T @SAINDEX_PRId@
+#endif /* PRIdSAIDX@W64BIT@_T */
+
+
+/*- Prototypes -*/
+
+/**
+ * Constructs the suffix array of a given string.
+ * @param T[0..n-1] The input string.
+ * @param SA[0..n-1] The output array of suffixes.
+ * @param n The length of the given string.
+ * @return 0 if no error occurred, -1 or -2 otherwise.
+ */
+DIVSUFSORT_API
+saint_t
+divsufsort@W64BIT@(const sauchar_t *T, saidx@W64BIT@_t *SA, saidx@W64BIT@_t n);
+
+/**
+ * Constructs the burrows-wheeler transformed string of a given string.
+ * @param T[0..n-1] The input string.
+ * @param U[0..n-1] The output string. (can be T)
+ * @param A[0..n-1] The temporary array. (can be NULL)
+ * @param n The length of the given string.
+ * @return The primary index if no error occurred, -1 or -2 otherwise.
+ */
+DIVSUFSORT_API
+saidx@W64BIT@_t
+divbwt@W64BIT@(const sauchar_t *T, sauchar_t *U, saidx@W64BIT@_t *A, saidx@W64BIT@_t n);
+
+/**
+ * Returns the version of the divsufsort library.
+ * @return The version number string.
+ */
+DIVSUFSORT_API
+const char *
+divsufsort@W64BIT@_version(void);
+
+
+/**
+ * Constructs the burrows-wheeler transformed string of a given string and suffix array.
+ * @param T[0..n-1] The input string.
+ * @param U[0..n-1] The output string. (can be T)
+ * @param SA[0..n-1] The suffix array. (can be NULL)
+ * @param n The length of the given string.
+ * @param idx The output primary index.
+ * @return 0 if no error occurred, -1 or -2 otherwise.
+ */
+DIVSUFSORT_API
+saint_t
+bw_transform@W64BIT@(const sauchar_t *T, sauchar_t *U,
+             saidx@W64BIT@_t *SA /* can NULL */,
+             saidx@W64BIT@_t n, saidx@W64BIT@_t *idx);
+
+/**
+ * Inverse BW-transforms a given BWTed string.
+ * @param T[0..n-1] The input string.
+ * @param U[0..n-1] The output string. (can be T)
+ * @param A[0..n-1] The temporary array. (can be NULL)
+ * @param n The length of the given string.
+ * @param idx The primary index.
+ * @return 0 if no error occurred, -1 or -2 otherwise.
+ */
+DIVSUFSORT_API
+saint_t
+inverse_bw_transform@W64BIT@(const sauchar_t *T, sauchar_t *U,
+                     saidx@W64BIT@_t *A /* can NULL */,
+                     saidx@W64BIT@_t n, saidx@W64BIT@_t idx);
+
+/**
+ * Checks the correctness of a given suffix array.
+ * @param T[0..n-1] The input string.
+ * @param SA[0..n-1] The input suffix array.
+ * @param n The length of the given string.
+ * @param verbose The verbose mode.
+ * @return 0 if no error occurred.
+ */
+DIVSUFSORT_API
+saint_t
+sufcheck@W64BIT@(const sauchar_t *T, const saidx@W64BIT@_t *SA, saidx@W64BIT@_t n, saint_t verbose);
+
+/**
+ * Search for the pattern P in the string T.
+ * @param T[0..Tsize-1] The input string.
+ * @param Tsize The length of the given string.
+ * @param P[0..Psize-1] The input pattern string.
+ * @param Psize The length of the given pattern string.
+ * @param SA[0..SAsize-1] The input suffix array.
+ * @param SAsize The length of the given suffix array.
+ * @param idx The output index.
+ * @return The count of matches if no error occurred, -1 otherwise.
+ */
+DIVSUFSORT_API
+saidx@W64BIT@_t
+sa_search@W64BIT@(const sauchar_t *T, saidx@W64BIT@_t Tsize,
+          const sauchar_t *P, saidx@W64BIT@_t Psize,
+          const saidx@W64BIT@_t *SA, saidx@W64BIT@_t SAsize,
+          saidx@W64BIT@_t *left);
+
+/**
+ * Search for the character c in the string T.
+ * @param T[0..Tsize-1] The input string.
+ * @param Tsize The length of the given string.
+ * @param SA[0..SAsize-1] The input suffix array.
+ * @param SAsize The length of the given suffix array.
+ * @param c The input character.
+ * @param idx The output index.
+ * @return The count of matches if no error occurred, -1 otherwise.
+ */
+DIVSUFSORT_API
+saidx@W64BIT@_t
+sa_simplesearch@W64BIT@(const sauchar_t *T, saidx@W64BIT@_t Tsize,
+                const saidx@W64BIT@_t *SA, saidx@W64BIT@_t SAsize,
+                saint_t c, saidx@W64BIT@_t *left);
+
+
+#ifdef __cplusplus
+} /* extern "C" */
+#endif /* __cplusplus */
+
+#endif /* _DIVSUFSORT@W64BIT@_H */